Song AA, Chen MT, Bobrow TL, Durr NJ.
arXiv 2024
[Preprint]
In vivo fundus imaging and computational refocusing with a diffuser-based fundus camera
Simmerer C, Morakis M, Gomez-Perez L, Liu A, Durr NJ.
arXiv 2024
[Preprint]
A Deep Learning Approach for Generating Intracranial Pressure Waveforms from Extracranial Signals Routinely Measured in the Intensive Care Unit
Nair SS, Guo A, Boen J, Aggarwal A, Chahal O, Tandon A, Patel M, Sankararaman S, Durr NJ, Azad TD, Pirracchio R, Stevens RD.
Computers in Medicine and Biology In Press 2024
[Journal Link]
GAN Inversion for Data Augmentation to Improve Colonoscopy Lesion Classification
Golhar M, Bobrow TL, Ngamruengphong S, Durr NJ.
IEEE J Biomed Health Inform. 2024
[Journal Link] [Preprint]
Thermal Characterization and Preclinical Validation of an Accessible, Carbon Dioxide-Based Cryotherapy System
Hu Y, Gordon N, Ogg K, Kraitchman DL, Durr NJ, Surtees B.
Bioengineering 11:4 2024
[Journal Link] [Preprint]
Colonoscopy 3D Video Dataset with Paired Depth from 2D-3D Registration
Bobrow TL, Golhar M, Vijayan R, Akshintala VS, Garcia JR, Durr NJ.
Medical Image Analysis 90 2023
[Journal Link]
[Preprint]
Lens free holographic imaging for urinary tract infection screening
McKay GN, Oommen A, Pacheco C, Chen MT, Ray SC, Vidal R, Haeffele BD, Durr NJ.
IEEE Transactions on Biomedical Engineering 70:3 2023
[Cover Article]
[Journal Link]
[Preprint]
Adaptive sparse reconstruction for lensless digital holography via PSF estimation and phase retrieval
Pacheco C, McKay GN, Oommen A, Durr NJ, Vidal R, Haeffele BD.
Optics Express 30:19 2022
[Journal Link]
Predicting subjective refraction with dynamic retinal image quality analysis
Gil A, Hernández CS, Nam AS, Varadaraj V, Durr NJ, Lim D, Dave SR, Lage E.
Scientific Reports 12:1 2022
[Journal Link]
Deep learning in biomedical optics
Tian L, Hunt B, Bell MAL, Yi J, Smith JT, Ochoa M, Intes X, Durr NJ.
Lasers in Surgery and Medicine 53:6 2021
[Journal Link] [Preprint]
A Deep Learning Bidirectional Temporal Tracking Algorithm for Automated Blood Cell Counting from Non-invasive Capillaroscopy Videos
Huang L, McKay GN, Durr NJ
MICCAI 12908:415-424 2021
[Journal Link] [Preprint]
Speckle illumination SFDI for projector-free optical property mapping
Chen MT, Papadakis M, Durr NJ
Optics Letters 46:3 2021
[Journal Link] [Preprint]
Scattering oblique plane microscopy for in-vivo blood cell imaging
McKay GN, Niemeier RC, Castro-Gonzalez C, Durr NJ
Biomedical Optics Express 12:5 2021
[Journal Link] [Preprint]
Improving colonoscopy lesion classification using semi-supervised deep learning
Golhar M, Bobrow TL, Khoshknab MP, Jit S, Ngamruengphong S, Durr NJ
IEEE Access Vol. 9 2021
[Journal Link]
[Preprint]
EndoSLAM dataset and an unsupervised monocular visual odometry and depth estimation approach for endoscopic videos
Ozyoruk KB, Gokceler GI, Bobrow TL, Coskun G, Incetan K, Almalioglu Y, Mahmood F, Curto E, Perdigoto L, Oliveira M, Sahin H, Araujo H, Alexandrino H, Durr NJ, Gilbert H, Turan M.
Medical Image Analysis 71 2021
[Journal Link] [Preprint]
VR-Caps: A Virtual Environment for Capsule Endoscopy
Incetan K, Celik IO, Obeid A, Gokceler GI, Ozyoruk KB, Almalioglu Y, Chen RJ, Mahmood F, Gilbert H, Durr NJ, Turan M
Medical Image Analysis 70 2021
[Journal Link] [Preprint]
Establishing a Quantitative Endpoint for Transarterial Embolization From Real-Time Pressure Measurements
Gowda PC, Chen VX, Sobral MC, Bobrow TL, Romer TG, Palepu AK, Guo JY, Kim DJ, Tsai AS, Chen S, Weiss CR, Durr NJ
Journal of Medical Devices 15:2 2021
[Journal Link]
A Cartilage Dicing Tool for Rapid Preparation of Rhinoplasty Grafts
Stephanian BA, Karki S, Sharma P, Leo KT, Di Meo MA, Ota M, Patel M, Byrne PJ, Durr NJ
Journal of Medical Devices 14:4 2020
[Journal Link]
Rapid tissue oxygenation mapping from snapshot structured-light images with adversarial deep learning
Chen MT, Durr NJ
Journal of Biomedical Optics 25:11 2020
[Journal Link]
[Editor's Spotlight]
[Cover Article]
[Preprint]
EndoL2H: Deep Super-Resolution for Capsule Endoscopy
Almalioglu Y, Ozyoruk KB, Gokce A, Incetan K, Gokceler GI, Simsek MA, Ararat K, Chen RJ, Durr NJ, Mahmood F, Turan M
IEEE Transactions on Medical Imaging 39:12 2020
[Journal Link]
[Preprint]
Imaging human blood cells in vivo with oblique back-illumination capillaroscopy
McKay GN, Mohan N, Durr NJ
Biomedical Optics Express, 11:5 2020
[Journal Link] [Cover Article] [Preprint]
A diffuser-based computational imaging funduscope
Li Y, McKay GN, Durr NJ*, Tian L*
Optics Express, 28:13, 2020
[Journal Link] [Preprint]
Visualization of blood cell contrast in nailfold capillaries with high-speed reverse lens mobile phone microscopy
McKay GN, Mohan N, Butterworth I, Bourquard A, Sanchez-Ferro A, Castro-Gonzalez C, Durr NJ
Biomedical Optics Express, 11:4 2020
[Journal Link]
Development of a low-cost imaging system for remote mosquito surveillance
Goodwin A, Glancey M, Ford T, Scavo L, Brey J, Heier C, Durr NJ, Acharya S
Biomedical Optics Express 11:5, 2020
[Journal Link] [Editor's Pick]
GANPOP: Generative Adversarial Network Prediction of Optical Properties from Single Snapshot Wide-field Images
Chen MT, Mahmood F, Sweer JA, Durr NJ
IEEE Transactions on Medical Imaging 39:6 2020
[Journal Link]
[Preprint]
Deep Adversarial Training for Multi-Organ Nuclei Segmentation in Histopathology Images
Mahmood F, Borders D, Chen R, McKay GN, Salimian KJ, Baras A, Durr NJ
IEEE Transactions on Medical Imaging 39:11 2020
[Journal Link]
[Preprint]
Curricular Advancement of Biomedical Engineering Undergraduate Design Projects Beyond 1 Year: A Pilot Study
Manbachi A, Logsdon EA, Yazdi Y, Durr NJ
Annals of Biomedical Engineering 48, 2020
[Journal Link]
A Novel Intermediate Attachment to Reduce Contamination in Reusable Core Needle Biopsy Devices
Berges A, Callanan M, Zawicki V, Shi R, Metzger S, Athey T, Ayyappan V, Farrell A, Manbachi A, Harvey S, Durr NJ
Journal of Medical Devices 14:1 2020
[Journal Link]
SLAM Endoscopy enhanced by adversarial depth prediction
Chen MT, Bobrow TL, Athey T, Mahmood F, Durr NJ
KDD Workshop on Applied Data Science for Healthcare 2019
[Preprint]
Validation of an affordable handheld wavefront autorefractor
Rubio M, Hernandez CS, Seco E, Perez-Merino P, Casares I, Dave SR, Lim D, Durr NJ, Lage E
Optometry and Vision Science 96:10 2019
[Journal Link]
Learning to Navigate Endoscopic Capsule Robots
Turan M, Almalioglu Y, Gilbert HB, Mahmood F, Durr NJ, Araujo H, Eren Sari A, Ajay A, Sitti M
IEEE Robotics and Automation Letters 4:3 2019
[Journal Link]
A Device for Preloaded, Trifolded Grafts to Facilitate Descemet Membrane Endothelial Keratoplasty
Chiang E, Barnes K, Cai S, Chen C, Subramanya A, Chaurasia A, Rosen A, Vora P, Durr NJ, Eghrari AO, Allen R.
Journal of Medical Devices 13:4 2019
[Journal Link]
Quality of eyeglass prescriptions from a low-cost wavefront autorefractor evaluated in rural India: results of a 708-participant field study
Durr NJ*, Dave SR*, Lim D, Joseph S, Ravilla TD, Lage E
BMJ Open Ophthalmology 4:1 2019
[Journal Link]
[Preprint]
Automated detection of neutropenia using noninvasive video microscopy of superficial capillaries
Pablo-Trinidad A, Butterworth I, Ledesma-Carbayo MJ, Vettenburg T, Sanchez-Ferro A, Soenksen L, Durr NJ, Arrate MB, Cerrato C, Humala K, Fabra Urdiol M, Del Rio C, Valles B, Chen Y, Hochberg EP, Castro-Gonzalez C, Bourquard A
American Journal of Hematology 94:8 2019
[Journal Link]
DeepLSR: a deep learning approach for laser speckle reduction
Bobrow TL, Mahmood F, Inserni M, Durr NJ
Biomedical Optics Express 10:6 2019
[Journal Link]
[Preprint]
Structured Prediction using cGANs with Fusion Discriminator
Mahmood F, Xu Wenhao, Durr NJ, Johnson JW, Yuille A
ICLR Workshop Paper 2019
[Open Review]
[Preprint]
Wide‐field optical property mapping and structured light imaging of the esophagus with spatial frequency domain imaging
Sweer JA, Chen MT, Salimian K, Battafarano RJ, Durr NJ
Journal of Biophotonics (Early View) 2019
[Journal Link]
Large dynamic range autorefraction with a low-cost diffuser wavefront sensor
McKay GN, Mahmood F, Durr NJ
Biomedical Optics Express 10:4 2019
[Journal Link]
[Preprint]
Multimodal Densenet
Mahmood F, Yang Z, Athey T, Durr NJ
arXiv 2019
[Preprint]
A Review of Options for Localization of Axillary Lymph Nodes in the Treatment of Invasive Breast Cancer
Woods RW, Camp MS, Durr NJ, Harvey SC
Academic Radiology 26:6 2019
[Journal Link]
Comparison of Tri-folded and Scroll-based Graft Viability in Preloaded Descemet Membrane Endothelial Keratoplasty
Barnes K, Chiang E, Chen C, Lohmeier J, Christy J, Chaurasia A, Rosen A, Vora P, Cai S, Subramanya A, Durr N, Allen R, Eghrari AO
Cornea 38:3 2019
[Journal Link]
A quantitative analysis of factors influencing lower lid retraction and involutional ectropion
Chen HC, Polisett TS, Zhu K, Phan BN, Durr NJ, Tian J, Mahoney NR
JPRAS 72 (1) 2019
[Journal Link]
Validation of a low-cost, carbon dioxide-based cryoablation system for percutaneous tumor ablation
Surtees B, Young S, Hu Y, Wang G, McChesney E, Kuroki G, Acree P, Thomas S, Blair T, Rastogi S, Kraitchman DL, Weiss C, Sukumar S, Harvey SC, Durr NJ.
PLoS One 14:7 2019
[Journal Link]
[Preprint]
Rethinking Monocular Depth Estimation with Adversarial Training
Chen R, Mahmood F, Yuille A, Durr NJ
arXiv 2019
[Preprint]
Viability of Descemet Membrane Endothelial Keratoplasty Grafts Folded in the Eye Bank
Lohmeier J, Christy J, Chiang E, Barnes K, Cai S, Chen C, Subramanya A, Chaurasia A, Rosen A, Vora P, Durr NJ, Allen R, Eghrari AO
Cornea 37 (11) 2018
[Journal Link]
Deep Learning and Conditional Random Fields-based Depth Estimation and Topographical Reconstruction from Conventional Endoscopy
Mahmood F, Durr NJ
Medical Image Analysis 48 2018
[Journal Link]
[Preprint]
Unsupervised Reverse Domain Adaptation for Synthetic Medical Images via Adversarial Training
Mahmood F, Chen R, Durr NJ
IEEE Transactions on Medical Imaging 37:12 2018
[Journal Link]
[Preprint]
Deep Learning with Cinematic Rendering: Fine-Tuning Deep Neural Networks Using Photorealistic Medical Images
Mahmood F, Chen R, Sudarsky S, Yu D, Durr NJ
Physics in Medicine and Biology 63 (18), 2018
[Journal Link]
[Preprint]
Toward dynamic lumbar punctures guidance based on single element synthetic tracked aperture ultrasound imaging
Zhang H, Kim Y, Lin M, Paredes M, Kannan K, Moghekar A, Durr NJ, Boctor E
Journal of Medical Imaging 5(2) 2018.
[Journal Link]
Starting a Medical Technology Venture as a Young Academic Innovator or Student Entrepreneur
Manbachi A, Kreamer-Tonin K, Walch P, Gamo NJ, Khoshakhlagh P, Zhang YS, Montague C, Acharya S, Logsdon EA, Allen RH, Durr NJ, Luciano MG, Theodore N, Brem H, Yazdi Y
Annals of Biomedical Engineering 2018
[Journal Link]